Current jobs related to PhD Student in Deep-Learning Conifer Genomics - Umeå, Västerbotten - Umeå University


  • Umeå, Västerbotten, Sweden Umeå University Full time

    Job DescriptionWe are seeking a highly motivated and skilled PhD student to join our research team at Umeå University. The successful candidate will be working on developing the mathematical theory of geometric deep learning, with a focus on equivariant networks and their applications.About the ProjectThe project is affiliated with the AI/Math track within...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    Experimental Physics PhD PositionUmeå University is seeking a highly motivated PhD student to join our Optical Frequency Comb Spectroscopy Group.About the Project:We are looking for a talented researcher to work on high-resolution broadband spectroscopy of molecules of importance in astrophysics. The project involves developing and applying optical...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    About the PositionThe opportunity to pursue a PhD studies in Computing Science for four years is now available at Umeå University. This position provides you with the chance to achieve the degree of Doctor in Computing Science while exploring topics in explainable machine learning.Job DescriptionThis project focuses on developing privacy-aware machine...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    About the PositionUmeå University is seeking a highly motivated PhD candidate to join our 'Ultrafast Nanoscience' group. The successful applicant will have the opportunity to conduct research on ultrafast spectroscopy in condensed matter nanosystems, interfacing exciting fields of research including ultrafast science, photonics, and magnetism.Key...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    The Department of Applied Physics and Electronics at Umeå University conducts research in various fields, including energy technology, laser spectroscopy, medical technology, electronics, and system engineering.A PhD student is sought for the research group Cooperative and intelligent embedded systems to work on Safe and Secure Intelligent Embedded...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    The Department of Computing Science at Umeå University is seeking a research engineer to contribute to the Wallenberg's research arena for Media and Language. The position involves setting up and maintaining a distributed environment for collaborative projects in machine learning.About the PositionThe main tasks of the advertised position include collecting...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    The Department of Applied Physics and Electronics is home to a team of around 90 researchers and conducting research in various fields, including energy technology, laser spectroscopy, and medical technology.We are seeking a PhD student in Applied Electronics to join our research group "Cooperative and intelligent embedded systems". The successful candidate...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    Umeå University is seeking a highly skilled Scientific Data Analyst to join our Computational Metabolomics Group. This permanent, full-time position offers an excellent opportunity to further improve and develop skills in addressing application-driven data science and bioinformatics challenges in metabolomics.We are now expanding our capacity to support...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    Project OverviewWe are seeking a highly motivated postdoctoral researcher to join our interdisciplinary team at the Laboratory for Molecular Infection Medicine Sweden (MIMS), the Swedish EMBL node, hosted at the Department of Molecular Biology. The successful candidate will work in a rodent model to investigate the biology of Plasmodium ookinete and oocyst...


  • Umeå, Västerbotten, Sweden Umeå University Full time

    The Department of Computing Science at Umeå University is seeking a highly skilled research engineer to contribute to the Wallenberg's research arena for Media and Language. This special fixed-term contract (SÄVA) will last 12 months, commencing September 1 or as agreed.Our department is a dynamic institution with approximately 120 employees from over 20...


  • Umeå, Västerbotten, Sweden Vattenfall Full time

    JobbbeskrivningI energibranschen är planeringen av nya fastigheters energi- och effektbehov en kritisk process. Vattenfall söker nu dig som vill bidra till vår vision om ett fossilfritt liv.För att uppnå detta mål måste vi säkerställa att våra beräkningar överensstämmer med det faktiska energi- och effektbehovet när fastigheterna tas i drift....


  • Umeå, Sweden Umeå University Full time

    Project description Ever advancing high-throughput DNA sequencing technologies continue to produce genome assemblies of larger genome sizes, such as conifers (10-40 Gb, 3-15x of human genome), wheat (15 Gb, 5x), axolotl salamander (32 Gb, 11x), and giant lungfish (43 Gb, 14x). Genome annotation (identifying various functional sequence elements) presents...


  • Umeå, Sweden Umeå University Full time

    Project description and tasks  Machine learning (‘artificial intelligence’) is having an immense impact on both society at large and research especially, and this impact is expected to increase. This boom is driven by so-called deep neural networks, a class of machine learning models proven incredibly powerful, versatile, and capable of solving many...


  • Umeå, Sweden Umeå University Full time

    We are looking for a PhD student in Molecular Biology and a special interest in parasite-vector interactions. The position at the Department of Molecular Biology at Umeå University is temporary for four years to start immediately or as agreed. The PhD student will participate in activities of a dynamic research environment including the host department...


  • Umeå, Sweden Umeå University Full time

    Project description The project will develop privacy-aware machine learning (ML) models. We are interested in building models that are explainable and are extracted from complex and heterogeneous data. Within explainable ML, we are interested in topics as provenance, interpretable and transparent models. Within privacy, we are interested in different...


  • Umeå, Sweden Umeå University Full time

    PhD position in Medical Science We are looking for a qualified candidate to embark on a PhD in Medical Science with an orientation towards Neurophysiology (sensorimotor neurophysiology). The position is at the Department of Medical and Translational Biology at Umeå University and is temporary for four years, to start during October 1st 2024 or as...


  • Umeå, Sweden Umeå University Full time

    Projects description The ‘Ultrafast Nanoscience’ group at Umeå University is looking for a highly motivated PhD candidate interested in performing research on ultrafast spectroscopy in condensed matter nanosystems. The project interfaces exciting fields of research, including ultrafast science, photonics and magnetism, with an overarching goal to...


  • Umeå, Sweden Umeå University Full time

    The Department of Applied Physics and Electronics currently has around 90 employees and conducts research in energy technology, laser spectroscopy, medical technology, electronics, and system engineering. For more information see . The research group “Cooperative and intelligent embedded systems” are recruiting a PhD student in Applied Electronics...


  • Umeå, Sweden Umeå University Full time

    Project description Current AI technology surpasses humans in pattern recognition tasks, but it falls short on general world knowledge understanding, common sense reasoning, and the human capabilities of explaining the process followed to solve a problem. Our project goal is to design and develop interactive systems that reason spatially and which are...

  • Student Marketeer

    3 weeks ago


    Umeå, Sweden Red Bull Full time

    FöretagsbeskrivningRed Bull Student Marketeers är en del av världens mest dynamiska och kraftfulla varumärkes- och produktambassadörsprogram. De förstår Red Bulls målgrupp och ansvarar för att driva varumärkesbilden och produktförståelsen på sitt campus och i sin region. Målet med Student Marketeer-programmet är att nå nya konsumenter,...


  • Umeå, Sweden Umeå University Full time

    The Department of Computing Science The Department of Computer Science is looking for a research engineer to contribute to the Wallenberg's research arena for Media and Language. The position is a special fixed-term contract (SÄVA) of 12 months starting September 1, 2024 or as agreed. The Department of Computing Science is a dynamic institution...


  • Umeå, Sweden Umeå University Full time

    Project description Interventions to promote lifelong learning show promising results but are hampered by large individual differences in response. It is evident that we need to rethink the premises of randomized controlled trials (RCTs) to better predict who will benefit from which intervention. As a first step in this process we sought to utilize...

  • Postdoctoral position

    6 months ago


    Umeå, Sweden Umeå University Full time

    Project description This Fellowship will be part of the Co-Creating Better Blue Programme recently funded by MISTRA which aims to develop ecosystem-based management processes where decisions are based on sustainability and democracy. The project's vision is to steer developments towards a more sustainable, open and democratic blue economy involving...


  • Umeå, Sweden Umeå University Full time

    Project description and working tasks The species that compose the human gut microbiome are poorly characterized at their molecular level, despite their important roles to keep a healthy state. The presence of pathogenic species or imbalances in the composition of commensal species are associated with disease. The mechanisms by which these species interact...


  • Umeå, Sweden Umeå University Full time

    Staff Scientist in Computational Metabolomics Job description We are now expanding our capacity to support life science researchers in metabolomics to transform complex data into meaningful biological and chemical interpretations. The successful applicant will be integrated in a national Computational Metabolomics Group jointly between the...

PhD Student in Deep-Learning Conifer Genomics

2 months ago


Umeå, Västerbotten, Sweden Umeå University Full time

Project Overview

We are seeking a highly motivated and skilled PhD student to join our team at Umeå University in the field of deep-learning conifer genomics. The successful candidate will be involved in the development of novel deep-learning driven computational tools for efficient identification of transposable elements in large plant genomes.

Research Focus

The PhD project will focus on the development of deep-learning driven methods to advance our understanding of the complexities of transposable elements in large plant genomes. The candidate will work at the interface of machine-learning, computational biology, and molecular biology, and will have the opportunity to collaborate with experimentalists and computational scientists across a wide range of disciplines.

Admission Requirements

To be eligible for this position, the applicant must have qualifications equivalent to a completed degree at second-cycle level, including at least 60 ECTS credits at second-cycle level. The successful candidate must have completed 90 ECTS relevant to the doctoral thesis project, with at least 30 ECTS in a subject closely related to the research topic.

Desirable Skills and Knowledge

The following skills and knowledge are highly desirable for this position:

  • Experience in standard molecular biological techniques or in machine-learning
  • Very good written and oral English language skills
  • Proficiency in working with computers and programming, e.g. in Linux Shell, R, Python, Julia, etc.

Application Process

The PhD student is expected to play an active role in developing this doctoral project and in the department. The assessments of the applicants are based on their qualifications and presumed ability to take part in doctoral education.