Image Analysis Lead

3 days ago

Uppsala, Uppsala, Sweden Navinci Full time 650,000 - 1,200,000 per year

We are hiring an image analysis lead to build and maintain advanced imaging pipelines for spatial-biology assays. You'll lead a small team, collaborate closely with R&D scientists, and deliver robust image analysis for both internal R&D and external service projects. This is a hands-on leadership role combining coding, scientific interpretation, and operational execution.

Key Responsibilities

  • Design and deploy automated workflows for registration, segmentation, and quantification of multiplex tissue images.
  • Combine open-source and commercial tools (e.g., QuPath, CellProfiler, Python scripts) to meet project requirements.
  • Lead a small science team; apply agile methods and sprint planning aligned to Navinci's timelines.
  • Work closely with assay developers to translate biological questions into quantitative image metrics.
  • Lead analysis for internal and external projects, delivering high-quality reports and visualizations.
  • Maintain reproducible codebases, apply validation frameworks, and pilot emerging tools or ML methods.
  • Play a key role in scaling Navinci's image analysis infrastructure to support a growing portfolio of spatial-proteomics assays and data-intensive projects.
  • Ensure delivery of reproducible, high-quality image analysis within project timelines and aligned to predefined accuracy and robustness criteria.

Qualifications

Required:

  • MSc or PhD in Bioimage Informatics, Computational Biology, or related field
  • 7+ years' experience in image analysis for tissue-based assays (biotech or life sciences)
  • Proficient in Python (NumPy, SciPy, scikit-image), MATLAB, or similar
  • Strong grasp of registration, segmentation, and spatial quantification techniques
  • Familiarity with tissue imaging challenges
  • Proven ability to lead and mentor small technical teams in an agile, fast-paced environment.
  • Strong project leadership, communication, and stakeholder engagement skills

Preferred:

  • Experience with containerized workflows and version control
  • Background in spatial omics or multiplexed imaging platforms

What We Offer

  • Lead image analysis in a cutting-edge spatial proteomics company
  • Work cross-functionally on impactful research and real-world applications
  • Agile environment with rapid iteration and team empowerment
  • Opportunity to grow your team and shape analysis infrastructure

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