Bioinformatician with focus on research support within image analysis

2 weeks ago


Uppsala, Uppsala, Sweden Imagej Full time

We in BIIF develop, implement, and adjust image analysis tools for quantitative analysis of microscopy data. Much focus is on large scale analysis based on machine learning and deep learning/AI. Have a look on our projects here 2 .
We are looking for a bioinformatician who is enthusiastic about joining us in this task. You will work with shorter and longer projects and offer research support via the BIIF nodes in Uppsala and Stockholm, and other universities in Sweden. The appointment also includes duties in the form of organizing user meetings/courses and workshops in digital image processing and analysis with life science applications. Supervision of MSc theses in the area is also part of the duties, as well as some involvement in research projects within Carolina Wählbys research group. 4

Requirements
  • Master degree and/or PhD degree within digital image analysis/image processing or similar, or alternatively in bioinformatics/biomedicine/biology or similar.
  • Documented experience of programming and development of digital image analysis methods
  • Excellent communication in English, both written and spoken
  • Experience from developing algorithms and analysis pipelines in the context of BioImage Analysis (i.e. identification and segmentation of cells and microorganisms in culture or in tissue sections, and quantification of biological parameters for these)
  • Experience from developing and working with machine learning and deep learning with applications in microscopy, such as tissue analysis
  • Experience in large-scale data analysis and visualization.
  • Experience in giving workshops and supervision.
  • Work on research reproducibility.

Type of employment Permanent position, with a 6 month probationary period. Scope of employment is 100%. Starting date as soon as possible or as agreed. Placement: Uppsala

For further information about the position please contact: ), @aklemm )

Application The application should include a letter where the applicant describes the motivation for applying for this position, the relevant qualifications, and research interests. The application should also include a CV and links to relevant publications and contact information for at least two reference persons. We would also like to know the earliest possible starting date.

You will find a lot of information about working and living in Sweden at . You are also welcome to contact International Faculty and Staff Services at .

#J-18808-Ljbffr

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